Ligand validation:1YKP

DHB: 3,4-DIHYDROXYBENZOIC ACID

DHB is a Ligand Of Interest in 1YKP designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1YKP_DHB_D_1550	26%	57%	0.233	0.873	1.1	0.55	-	-	1	0	100%	1
1YKP_DHB_L_5550	19%	61%	0.259	0.856	0.84	0.65	-	-	3	0	100%	1
1YKP_DHB_A_550	16%	51%	0.282	0.855	1.14	0.78	1	-	6	0	100%	1
1YKP_DHB_J_4550	16%	66%	0.309	0.882	0.74	0.59	-	-	3	0	100%	1
1YKP_DHB_H_3550	13%	63%	0.28	0.825	0.91	0.52	-	-	6	0	100%	1
1YKP_DHB_F_2550	9%	55%	0.341	0.832	1.19	0.56	1	-	1	0	100%	1
3LMX_DHB_N_2	69%	16%	0.118	0.932	2.63	1.07	2	1	0	0	100%	0.95
3MV6_DHB_N_540	47%	26%	0.163	0.902	1.77	1.25	2	1	2	0	100%	0.8
1YKL_DHB_B_550	47%	61%	0.138	0.876	0.99	0.53	-	-	3	0	100%	1
1YKN_DHB_H_3550	39%	34%	0.181	0.889	1.88	0.78	4	-	5	0	100%	1
8ZJ5_DHB_C_401	99%	38%	0.049	0.984	1.02	1.38	-	2	2	0	100%	1
6S33_DHB_B_602	92%	39%	0.085	0.975	0.95	1.44	-	3	0	0	100%	1
3DX5_DHB_A_289	91%	30%	0.08	0.968	1.47	1.32	1	2	0	0	100%	1
5X1M_DHB_B_502	90%	34%	0.095	0.977	1.76	0.87	3	-	2	0	100%	1
8JQP_DHB_A_402	89%	54%	0.072	0.95	1	0.79	1	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.