ATP: ADENOSINE-5'-TRIPHOSPHATE
ATP is a Ligand Of Interest in 1PK8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1PK8_ATP_G_806 | 78% | 54% | 0.115 | 0.959 | 0.81 | 0.97 | - | 3 | 0 | 0 | 100% | 0.71 |
1PK8_ATP_B_801 | 72% | 54% | 0.131 | 0.956 | 0.79 | 0.98 | - | 3 | 0 | 0 | 100% | 0.8 |
1PK8_ATP_A_800 | 69% | 54% | 0.153 | 0.968 | 0.78 | 0.98 | - | 2 | 0 | 0 | 100% | 0.8 |
1PK8_ATP_F_805 | 65% | 54% | 0.139 | 0.941 | 0.8 | 0.97 | - | 3 | 0 | 0 | 100% | 0.65 |
1PK8_ATP_E_804 | 63% | 52% | 0.146 | 0.944 | 0.83 | 1.01 | - | 4 | 0 | 0 | 100% | 0.6 |
1PK8_ATP_H_807 | 63% | 54% | 0.141 | 0.937 | 0.78 | 0.98 | - | 4 | 0 | 0 | 100% | 0.5 |
1PK8_ATP_D_803 | 61% | 54% | 0.159 | 0.948 | 0.77 | 0.98 | - | 3 | 0 | 0 | 100% | 0.76 |
1PK8_ATP_C_802 | 55% | 54% | 0.151 | 0.921 | 0.77 | 1 | - | 4 | 0 | 0 | 100% | 0.55 |
3MHY_ATP_C_113 | 100% | 53% | 0.034 | 0.992 | 0.86 | 0.94 | - | 2 | 0 | 0 | 100% | 1 |
4CBU_ATP_A_1369 | 100% | 50% | 0.046 | 0.997 | 0.68 | 1.25 | - | 3 | 0 | 0 | 100% | 1 |
5LPA_ATP_A_301 | 100% | 51% | 0.049 | 0.995 | 0.79 | 1.11 | - | 3 | 0 | 0 | 100% | 1 |
3GAI_ATP_A_999 | 100% | 44% | 0.048 | 0.993 | 0.93 | 1.26 | 1 | 4 | 0 | 0 | 100% | 1 |
3NCQ_ATP_C_200 | 100% | 39% | 0.04 | 0.984 | 1.04 | 1.4 | - | 5 | 0 | 0 | 100% | 1 |