AP5: BIS(ADENOSINE)-5'-PENTAPHOSPHATE
AP5 is a Ligand Of Interest in 1E4Y designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1E4Y_AP5_B_215 | 78% | 35% | 0.139 | 0.983 | 1.14 | 1.52 | 3 | 7 | 6 | 0 | 100% | 1 |
| 1E4Y_AP5_A_215 | 72% | 38% | 0.148 | 0.974 | 1.02 | 1.45 | 2 | 6 | 8 | 0 | 100% | 1 |
| 1AKE_AP5_A_215 | 89% | 28% | 0.088 | 0.968 | 1.21 | 1.8 | 5 | 6 | 6 | 0 | 100% | 0.9386 |
| 8BQF_AP5_F_301 | 88% | 43% | 0.091 | 0.967 | 0.66 | 1.59 | - | 1 | 5 | 0 | 100% | 1 |
| 4X8O_AP5_A_301 | 85% | 1% | 0.109 | 0.976 | 4.99 | 2.63 | 17 | 10 | 0 | 0 | 100% | 1 |
| 4X8L_AP5_A_301 | 79% | 2% | 0.101 | 0.946 | 4.9 | 2.56 | 17 | 9 | 0 | 0 | 100% | 1 |
| 3X2S_AP5_A_303 | 75% | 22% | 0.144 | 0.979 | 1.19 | 2.21 | 4 | 9 | 10 | 0 | 100% | 1 |
| 3AKY_AP5_A_301 | 99% | 25% | 0.057 | 0.991 | 1.42 | 1.76 | 8 | 9 | 0 | 0 | 100% | 1 |
| 3BE4_AP5_A_219 | 99% | 12% | 0.059 | 0.991 | 2.08 | 2.2 | 10 | 13 | 1 | 0 | 100% | 1 |
| 4MKF_AP5_A_303 | 99% | 30% | 0.06 | 0.988 | 1.35 | 1.55 | 6 | 8 | 0 | 0 | 100% | 1 |
| 4MKG_AP5_A_303 | 99% | 49% | 0.06 | 0.988 | 0.96 | 1.03 | 3 | 3 | 0 | 0 | 100% | 1 |
| 1AKY_AP5_A_301 | 98% | 37% | 0.059 | 0.985 | 1.12 | 1.42 | 4 | 6 | 0 | 0 | 100% | 1 |
