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NMR Solution Structure of the Monomeric Catalytic C-terminal Lobe of the E6AP HECT E3 Ubiquitin Ligase
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE NEO 1200 2 3D HNCO 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 950 3 3D HN(CA)CO 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE NEO 900 4 3D HNCACB 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 800 5 3D HN(COCA)CB 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE NEO 900 6 3D 1H-13C NOESY aliphatic 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 950 7 3D 1H-13C NOESY aromatic 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 700 8 3D 1H-15N NOESY 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 950 9 3D H(CCO)NH 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 800 10 3D HCCH-TOCSY 20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT 95% H2O/5% D2O 100 mM 7.7 AMBIENT Pa 298 Bruker AVANCE III 950
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 3 Bruker AVANCE NEO 1200 1 Bruker AVANCE III 950 2 Bruker AVANCE NEO 900 4 Bruker AVANCE III 800 5 Bruker AVANCE III 700
NMR Refinement Method Details Software torsion angle dynamics Poky
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 400 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Poky Manthey, Tonelli, Clos II, Rahimi, Markley and Lee 2 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 3 chemical shift assignment Poky Manthey, Tonelli, Clos II, Rahimi, Markley and Lee 4 peak picking Poky