9VG5 | pdb_00009vg5

NMR Solution Structure of the Monomeric Catalytic C-terminal Lobe of the E6AP HECT E3 Ubiquitin Ligase

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE NEO 1200
2	3D HNCO	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 950
3	3D HN(CA)CO	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE NEO 900
4	3D HNCACB	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 800
5	3D HN(COCA)CB	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE NEO 900
6	3D 1H-13C NOESY aliphatic	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 950
7	3D 1H-13C NOESY aromatic	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 700
8	3D 1H-15N NOESY	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 950
9	3D H(CCO)NH	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 800
10	3D HCCH-TOCSY	20 mM NaPi, 100 mM NaCl, 0.15 mM DSS, 5 mM DTT	95% H2O/5% D2O	100 mM	7.7	AMBIENT Pa	298	Bruker AVANCE III 950

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
3	Bruker	AVANCE NEO	1200
1	Bruker	AVANCE III	950
2	Bruker	AVANCE NEO	900
4	Bruker	AVANCE III	800
5	Bruker	AVANCE III	700

NMR Refinement
Method	Details	Software
torsion angle dynamics		Poky

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	400
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Poky		Manthey, Tonelli, Clos II, Rahimi, Markley and Lee
2	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
3	chemical shift assignment	Poky		Manthey, Tonelli, Clos II, Rahimi, Markley and Lee
4	peak picking	Poky

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.