9XEA | pdb_00009xea

Structure of the transmembrane domain dimer of human IL-7R V253G mutant


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N TROSY-HSQC0.6 mM [U-100% 13C; U-100% 15N; U-85% 2H] The transmembrane domain of the IL-7R-V253G dimer, 60 mM POPC, 150 mM DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 600
22D 1H-13C HSQC0.6 mM [U-13C; U-15N] Transmembrane domain of the IL-7R V253G mutant, 60 mM deuterated Deuterated POPC, 150 mM deuterated Deuterated DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 900
33D TROSY HNCA0.6 mM [U-100% 13C; U-100% 15N; U-85% 2H] The transmembrane domain of the IL-7R-V253G dimer, 60 mM POPC, 150 mM DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 600
43D TROSY HN(CO)CA0.6 mM [U-100% 13C; U-100% 15N; U-85% 2H] The transmembrane domain of the IL-7R-V253G dimer, 60 mM POPC, 150 mM DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 600
53D TROSY HNCO0.6 mM [U-100% 13C; U-100% 15N; U-85% 2H] The transmembrane domain of the IL-7R-V253G dimer, 60 mM POPC, 150 mM DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 600
73D 1H-15N NOESY-TROSY0.6 mM [U-13C; U-15N] Transmembrane domain of the IL-7R V253G mutant, 60 mM deuterated Deuterated POPC, 150 mM deuterated Deuterated DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 900
63D 1H-13C NOESY0.6 mM [U-13C; U-15N] Transmembrane domain of the IL-7R V253G mutant, 60 mM deuterated Deuterated POPC, 150 mM deuterated Deuterated DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 900
83D 1H-15N NOESY-TROSY0.4 mM [U-15N; U-2H] Transmembrane domain of the IL-7R V253G mutant, 0.4 mM [U-13C] Transmembrane domain of the IL-7R V253G mutant, 60 mM deuterated Deuterated POPC, 150 mM deuterated Deuterated DHPC, 25 mM MES90% H2O/10% D2O25 mM6.51 atm306Bruker AVANCE III 900
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III900
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number15
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
2data analysisTALOS+Shen, Delaglio, Cornilescu, Bax
3chemical shift assignmentXEASYBartels et al.
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax