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Photo-Induced Distance-Dependent Electron Transfer of Fluorescent Proteins- PsmO-Cu6.6 (PSmOrange-copper-water pH6.6)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 291 0.2M NaCl, 20-28%
PEG3350
Crystal Properties Matthews coefficient Solvent content 2.14 42.42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 36.89 α = 90 b = 83.31 β = 111.85 c = 39.28 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2023-05-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL10U2 0.97918 SSRF BL10U2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 83.31 98.7 0.073 0.994 14.5 5.6 31555
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.55 1.59 0.232 0.899
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.55 41.69 29996 1533 98.65 0.21447 0.21394 0.2236 0.22466 0.2288 RANDOM 14.367
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.62 0.86 -1.18 -0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 13.367 r_dihedral_angle_1_deg 7.476 r_dihedral_angle_2_deg 3.575 r_long_range_B_refined 2.605 r_long_range_B_other 2.595 r_scangle_other 1.601 r_mcangle_it 1.041 r_mcangle_other 1.041 r_angle_refined_deg 0.997 r_scbond_it 0.984
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 13.367 r_dihedral_angle_1_deg 7.476 r_dihedral_angle_2_deg 3.575 r_long_range_B_refined 2.605 r_long_range_B_other 2.595 r_scangle_other 1.601 r_mcangle_it 1.041 r_mcangle_other 1.041 r_angle_refined_deg 0.997 r_scbond_it 0.984 r_scbond_other 0.974 r_mcbond_it 0.625 r_mcbond_other 0.625 r_angle_other_deg 0.374 r_chiral_restr 0.05 r_bond_refined_d 0.004 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1820 Nucleic Acid Atoms Solvent Atoms 38 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement Aimless data scaling XDS data reduction MOLREP phasing PDB_EXTRACT data extraction