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Linear fragment of lycosin9I with anti-MRSA activity
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 0.12 mM Lycosin 9I in LPPG micelle, 16.8 mM LPPG, 5 % [U-99% 2H] D2O 95% H2O/5% D2O 0.01 mM 4.5 AMBIENT Pa 318 Bruker AVANCE III 700 2 2D 1H-1H TOCSY 0.12 mM Lycosin 9I in LPPG micelle, 16.8 mM LPPG, 5 % [U-99% 2H] D2O 95% H2O/5% D2O 0.01 mM 4.5 AMBIENT Pa 318 Bruker AVANCE III 800 3 2D 1H-13C HSQC aliphatic 0.12 mM Lycosin 9I in LPPG micelle, 16.8 mM LPPG, 5 % [U-99% 2H] D2O 95% H2O/5% D2O 0.01 mM 4.5 AMBIENT Pa 318 Bruker AVANCE III 700 4 2D 1H-15N HSQC 0.12 mM Lycosin 9I in LPPG micelle, 16.8 mM LPPG, 5 % [U-99% 2H] D2O 95% H2O/5% D2O 0.01 mM 4.5 AMBIENT Pa 318 Bruker AVANCE III 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 700 2 Bruker AVANCE III 800
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA 3.98.13 Guntert, Mumenthaler and Wuthrich 2 structure calculation CYANA 3.98.13 Guntert, Mumenthaler and Wuthrich 3 collection TopSpin 3.5 Bruker Biospin 4 chemical shift assignment CARA Keller and Wuthrich 5 peak picking CARA Keller and Wuthrich