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A solution NMR model of Z-form DNA binding with ligand CBL0137
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 6.0 mM DNA (5'-D(*CP*GP*CP*(FG)P*CP*G)-3') 90% H2O/10% D2O 2.0 M 7.0 1 atm 298 Bruker AVANCE III 500 2 1D 6.0 mM DNA (5'-D(*CP*GP*CP*(FG)P*CP*G)-3') 90% H2O/10% D2O 2.0 M 7.0 1 atm 298 Bruker AVANCE III 500 3 1D 6.0 mM DNA (5'-D(*CP*GP*CP*(FG)P*CP*G)-3') 90% H2O/10% D2O 2.0 M 7.0 1 atm 298 Bruker AVANCE III 500 4 1D 6.0 mM DNA (5'-D(*CP*GP*CP*(FG)P*CP*G)-3') 100% D2O 2.0 M 7.0 1 atm 298 Bruker AVANCE III 500
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 500
NMR Refinement Method Details Software molecular dynamics Discovery Studio
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment MestreLab (Mnova / MestReNova / MestReC) Carballas 2 chemical shift calculation MestreLab (Mnova / MestReNova / MestReC) Carballas 5 collection TopSpin Bruker Biospin 6 refinement Discovery Studio Martinez 3 structure calculation Discovery Studio Martinez