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Cryo-EM structure of Gi coupled Sphingosine 1-phosphate receptor bound with HY-X-1011
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.26 f_angle_d 0.631 f_chiral_restr 0.044 f_plane_restr 0.005 f_bond_d 0.004
Sample S1PR1/Gi complex with HY-X-1011 Sample Components S1PR1/Gi scFv16
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 1019239 Reported Resolution (Å) 2.79 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 56.14
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1100 Maximum Defocus (nm) 1900 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC MODEL REFINEMENT PHENIX 1.20.1_4487 RECONSTRUCTION cryoSPARC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE