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Encounter complex structure of E2N and Ubiquitin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D PRE 0.6 mM [U-15N] Ubi, 0.2 mM E2N, 20 mM HEPES, 90 % H2O, 10 % [U-2H] D2O 90% H2O/10% D2O 0.02 M 7.5 1 atm 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 240 Conformers Submitted Total Number 3 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 peak picking NMRPipe 2010 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 3 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman