9T3O | pdb_00009t3o

Solution structure of thanatin in complex with LptDm

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	600 uM [U-13C; U-15N; U-2H] LptDm, 540 uM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700
2	3D 1H-13C NOESY aliphatic	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE III 900
3	3D 1H-13C NOESY aromatic	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700
4	3D 1H-15N NOESY	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700
5	3D HNCO	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 600
6	3D HNCACB	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700
7	3D HN(COCA)CB	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700
8	3D HCCH-TOCSY	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700
9	3D HBHA(CO)NH	1 mM [U-13C; U-15N] LptDm, 1.5 mM thanatin	93% H2O/7% D2O	150 mM	7	1 atm	310	Bruker AVANCE NEO 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE NEO	700
2	Bruker	AVANCE NEO	600
3	Bruker	AVANCE III	900

NMR Refinement
Method	Details	Software
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber	Amber19	OpenMM
2	structure calculation	CYANA	3.98	Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	CcpNmr Analysis	3.2	CCPN
4	peak picking	CcpNmr Analysis	3.2	CCPN