☰ Navigation Tabs
Human fumarylacetoacetate hydrolase (FAH) in complex with S1.1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 9SX4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 291 0.1 M Bis-Tris pH 5.5 and 7.0 at 25% to PEG 3350.
Crystal Properties Matthews coefficient Solvent content 2.82 56.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.93 α = 90 b = 104.991 β = 98.041 c = 75.931 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2022-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALBA BEAMLINE XALOC 0.97926 ALBA XALOC
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.789 61.128 98.96 0.9983 13.158 6.85 96907
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.789 1.82 0.5705
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.789 61 96907 4820 98.957 0.183 0.1819 0.1827 0.2078 0.2088 28.907
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.198 -0.178 -1.114 -0.032
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.31 r_dihedral_angle_3_deg 12.386 r_dihedral_angle_1_deg 6.764 r_lrange_it 6.489 r_scangle_it 4.988 r_dihedral_angle_2_deg 4.922 r_scbond_it 3.315 r_mcangle_it 2.893 r_mcbond_it 1.988 r_angle_refined_deg 1.515
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.31 r_dihedral_angle_3_deg 12.386 r_dihedral_angle_1_deg 6.764 r_lrange_it 6.489 r_scangle_it 4.988 r_dihedral_angle_2_deg 4.922 r_scbond_it 3.315 r_mcangle_it 2.893 r_mcbond_it 1.988 r_angle_refined_deg 1.515 r_nbtor_refined 0.314 r_nbd_refined 0.214 r_symmetry_xyhbond_nbd_refined 0.158 r_symmetry_nbd_refined 0.149 r_metal_ion_refined 0.139 r_xyhbond_nbd_refined 0.12 r_chiral_restr 0.109 r_gen_planes_refined 0.007 r_bond_refined_d 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6544 Nucleic Acid Atoms Solvent Atoms 333 Heterogen Atoms 96
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction autoPROC data scaling PHASER phasing