9T0O | pdb_00009t0o

Solution structure of Nanofitin C10 in complex with a 12unit aromatic oligoamide foldamer

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D x2-filtered 1H-1H NOESY	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
2	2D x2-filtered 1H-1H NOESY	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
3	2D 1H-1H NOESY	250 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 250 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	100% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
4	3D 1H-15N NOESY	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
5	1D 1H	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
6	2D 1H-15N HSQC	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
7	3D HNCO	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
8	3D HNCACO	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
9	3D HNCA	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
10	3D CBCA(CO)NH	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
11	3D HACACONH	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
12	2D 1H-13C HSQC	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
13	2D 1H-13C ct-HSQC	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
14	3D CCH-TOCSY	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
15	3D H(CCO)NH	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800
16	3D C(CO)NH	550 uM [U-100% 13C; U-100% 15N] Foldamer-binding Nanofitin C10, 550 uM Foldamer (FOL), 137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 5 % v/v DMSO	90% H2O/10% D2O	156 mM	7.4	1 atm	298	Bruker AVANCE NEO 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE NEO	800

NMR Refinement
Method	Details	Software
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	all calculated structures submitted
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin	4	Bruker Biospin
5	processing	NMRPipe	10.9	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	structure calculation	Amber		Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
3	chemical shift assignment	NMRFAM-SPARKY	1.470	powered by Sparky 3.190 (Goddard)
4	peak picking	NMRFAM-SPARKY	1.470	powered by Sparky 3.190 (Goddard)
6	refinement	ARIA	2.3.2