tbPEX38(65-134) in complex with tbPEX19(1-50)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE NEO 1200
52D 1H-13C HSQC400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE NEO 1200
43D HNCACB400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE NEO 1200
33D H(CCO)NH400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE NEO 1200
23D HNCO400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE NEO 1200
253D HCACO400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE NEO 1200
243D HCCH-TOCSY400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
233D 1H-13C NOESY400 uM [U-100% 13C; U-100% 15N] tbPEX19, 1000 mM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol100% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 950
223D 1H-15N NOESY400 uM [U-100% 15N] tbPEX19, 1000 uM tbPEX38, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
212D 1H-15N HSQC300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
202D 1H-13C HSQC aliphatic300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
262D 1H-13C HSQC aromatic300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
193D HNCACB300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
183D H(CCO)NH300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
173D HNCO300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
163D HCACO300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
273D HCCH-TOCSY300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol100% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 950
153D 1H-13C NOESY300 uM [U-100% 13C; U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol100% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 900
133D 1H-15N NOESY300 uM [U-100% 15N] tbPEX38, 800 uM tbPEX19, 20 mM sodium phosphate, 100 mM sodium chloride, 1 mM dithiothreitol90% H2O/10% D2O0.22 mM6.5AMBIENT atm298Bruker AVANCE III HD 950
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD900
2BrukerAVANCE III HD950
3BrukerAVANCE NEO1200
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin3.6Bruker Biospin
2peak pickingCcpNmr Analysis2.4.2Vranken, Boucher et al. 2005
3chemical shift assignmentCcpNmr Analysis2.4.2Vranken, Boucher et al. 2005
4structure calculationCYANA3.98.15Guntert, Mumenthaler and Wuthrich
6refinementAmber20Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman