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The C-terminal domain of remorin from Nicotiana benthamiana
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 293 The best crystals of NbREM1.1-97-208 grew from protein solution concentrated to 11.07mg/ml 0.1M HEPES PH 7.5; 0.2M ammonium acetate; 25% PEG3350 in the presence of 0.5 % w/v n-Octyl-beta-D-glucoside. SeMet crystals grew from the same conditions.
Crystal Properties Matthews coefficient Solvent content 3.06 59.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 26.554 α = 90 b = 99.134 β = 95.786 c = 128.698 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2021-01-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL18U1 0.97853 SSRF BL18U1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 78.51 99.8 0.999 13.9 6.8 22997
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.6 0.934
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD FREE R-VALUE 2.5 78.509 22976 1102 99.766 0.248 0.2456 0.2496 0.2914 0.2943 81.868
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 7.678 -1.27 3.245 -10.451
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.762 r_dihedral_angle_3_deg 18.077 r_lrange_it 16.908 r_scangle_it 14.711 r_mcangle_it 13.342 r_dihedral_angle_4_deg 10.911 r_scbond_it 10.104 r_mcbond_it 8.91 r_dihedral_angle_1_deg 3.614 r_angle_refined_deg 1.088
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.762 r_dihedral_angle_3_deg 18.077 r_lrange_it 16.908 r_scangle_it 14.711 r_mcangle_it 13.342 r_dihedral_angle_4_deg 10.911 r_scbond_it 10.104 r_mcbond_it 8.91 r_dihedral_angle_1_deg 3.614 r_angle_refined_deg 1.088 r_nbtor_refined 0.277 r_symmetry_nbd_refined 0.205 r_symmetry_xyhbond_nbd_refined 0.198 r_nbd_refined 0.191 r_xyhbond_nbd_refined 0.184 r_ncsr_local_group_6 0.123 r_ncsr_local_group_3 0.121 r_ncsr_local_group_4 0.118 r_ncsr_local_group_2 0.116 r_ncsr_local_group_1 0.11 r_ncsr_local_group_5 0.078 r_chiral_restr 0.07 r_bond_refined_d 0.005 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3702 Nucleic Acid Atoms Solvent Atoms 77 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling CRANK2 phasing