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COLLAGENE_LIKE SEQUENCE (PPG)10 UNDER 1.4 GIGA PASCALS
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 9I9A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 290 Vapor infusion of diglyme in well containing 10 muL of lyophilised (PPG)10 (5mg/mL in acetic acid 1O%)
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 25.52 α = 90 b = 25.82 β = 90 c = 179.36 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 290 PIXEL DECTRIS EIGER X 9M 2019-02-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE CRISTAL 0.5810 SOLEIL CRISTAL
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.085 25.557 83.1 0.23 0.99 4 3.9 6410 28.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.085 2.15 0.47 0.97
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS FREE R-VALUE 2.085 25.557 6410 313 83.106 0.262 0.2578 0.2578 0.3392 0.3392 22.908
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.018 -0.009 0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 8.165 r_lrange_it 7.395 r_mcangle_it 2.974 r_scangle_it 1.773 r_angle_refined_deg 1.764 r_mcbond_it 1.758 r_scbond_it 1.092 r_symmetry_xyhbond_nbd_refined 0.378 r_symmetry_nbd_refined 0.358 r_nbtor_refined 0.348
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 8.165 r_lrange_it 7.395 r_mcangle_it 2.974 r_scangle_it 1.773 r_angle_refined_deg 1.764 r_mcbond_it 1.758 r_scbond_it 1.092 r_symmetry_xyhbond_nbd_refined 0.378 r_symmetry_nbd_refined 0.358 r_nbtor_refined 0.348 r_xyhbond_nbd_refined 0.275 r_nbd_refined 0.272 r_chiral_restr 0.093 r_gen_planes_refined 0.013 r_bond_refined_d 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1080 Nucleic Acid Atoms Solvent Atoms 106 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction STARANISO data scaling MOLREP phasing