Synthetic chimeric inhibitor peptide of the AuroraA kinase/N-Myc complex - SCPmod
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1 mM SCPmod | 90% H2O/10% D2O | 0 mM | 6.5 | 1 atm | 293.15 | Bruker Ascend 600 600 |
| 2 | 2D 1H-13C HSQC | 1 mM SCPmod | 90% H2O/10% D2O | 0 mM | 6.5 | 1 atm | 293.15 | Bruker Ascend 600 600 |
| 3 | 2D 1H-1H TOCSY | 1 mM SCPmod | 90% H2O/10% D2O | 0 mM | 6.5 | 1 atm | 293.15 | Varian AS600 600 |
| 4 | 2D 1H-1H ROESY | 1 mM SCPmod | 90% H2O/10% D2O | 0 mM | 6.5 | 1 atm | 293.15 | Varian AS600 600 |
| 5 | 2D 1H-13C HCQC-TOCSY | 1 mM SCPmod | 90% H2O/10% D2O | 0 mM | 6.5 | 1 atm | 293.15 | Bruker Ascend 600 600 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | Ascend 600 | 600 |
| 2 | Varian | AS600 | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| Energy minimization with explicit water | CNS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | all calculated structures submitted |
| Conformers Calculated Total Number | 500 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 3 | chemical shift assignment | NMRFAM-SPARKY | Lee W, Tonelli M, Markley JL | |
| 4 | peak picking | NMRFAM-SPARKY | Lee W, Tonelli M, Markley JL | |














