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Primed-state RyR1 in 0.05% POPC micelles, in complex with a nanobody and FKBP
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 8.048 f_angle_d 0.7709 f_chiral_restr 0.0445 f_plane_restr 0.006 f_bond_d 0.0034
Sample Ryanodine receptor 1 complex with nanobody and FKBP12 Sample Components Ryanodine receptor 1 Nanobody 9657 Peptidyl-prolyl cis-trans isomerase FKBP1B
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 39983 Reported Resolution (Å) 3.3 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 60
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model JEOL CRYO ARM 300 Minimum Defocus (nm) 1500 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model JEOL CRYOSPECPORTER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.3.0 CTF CORRECTION RELION 4.1 INITIAL EULER ASSIGNMENT cryoSPARC 3.0 CLASSIFICATION RELION 4.1 RECONSTRUCTION cryoSPARC 4.31
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 333223 Particles were picked by template picking in Cryosparc