Experiment: 9P4U

X-RAY DIFFRACTION

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	6	292	Protein: 7.6mg/ml, 0.5M Sodium chloride, 0.01M Tris pH 8.3; Screen: PACT (B10), 0.2M Magnesium chloride, 0.1M MES (pH 6.0), 20% (w/v) PEG6000 Cryo: drop conditions

Crystal Properties
Matthews coefficient	Solvent content
1.9	35.4

Symmetry
Space Group	P 21 21 21

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER X 9M		2021-12-17	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 21-ID-D	0.97895	APS	21-ID-D

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	R Sym I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2	30	99.8	0.181	0.181	0.193	0.067	0.993	10.7	8		15239		-3	25.1

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2	2.03	100		0.341	0.731	2	8.1

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	2	29.62	14374	771	99.77	0.199	0.1966	0.2101	0.2437	0.2551	RANDOM	33.853

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-3.61			1.79		1.82

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	29.513
r_dihedral_angle_4_deg	11.661
r_dihedral_angle_3_deg	9.925
r_dihedral_angle_1_deg	3.665
r_angle_refined_deg	1.535
r_angle_other_deg	0.372
r_chiral_restr	0.067
r_gen_planes_refined	0.056
r_gen_planes_other	0.049
r_bond_refined_d	0.007

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	29.513
r_dihedral_angle_4_deg	11.661
r_dihedral_angle_3_deg	9.925
r_dihedral_angle_1_deg	3.665
r_angle_refined_deg	1.535
r_angle_other_deg	0.372
r_chiral_restr	0.067
r_gen_planes_refined	0.056
r_gen_planes_other	0.049
r_bond_refined_d	0.007
r_bond_other_d	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1795
Nucleic Acid Atoms
Solvent Atoms	110
Heterogen Atoms	11

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9P4U | pdb_00009p4u