☰ Navigation Tabs
KDM6B-nucleosome structure stabilized by H3K27C-UNC8015 covalent conjugate
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 28.649 f_angle_d 0.78 f_chiral_restr 0.073 f_bond_d 0.005 f_plane_restr 0.005
Sample KDM6B-nucleosome complex stabilized by H3K27C-UNC8015 covalent conjugate Sample Components histones of nucleosome Widom601 sequence with 20 bp linker DNA at both ends. Mouse KDM6B C-terminal domain
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE-PROPANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 43458 Reported Resolution (Å) 3.16 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 55
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TALOS ARCTICA Minimum Defocus (nm) 500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 45000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL REFINEMENT PHENIX 1.21.2_5419:
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 2417051