9NDY | pdb_00009ndy

Composite baseplate asymmetric unit of JohannRWettstein (Bas63)


ELECTRON MICROSCOPY
Sample
Escherichia phage JohannRWettstein
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameETHANE-PROPANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles14390
Reported Resolution (Å)3.83
Resolution MethodFSC 0.143 CUT-OFF
Other DetailsThe final reconstruction is a composite reconstruction of maps under accessions:EMD-49262, EMD-49264 and EMD-49265. Particle number and resolution are ...The final reconstruction is a composite reconstruction of maps under accessions:EMD-49262, EMD-49264 and EMD-49265. Particle number and resolution are reported from the consensus reconstruction used (EMD-49262).
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeFEI FALCON III (4k x 4k)
Electron Dose (electrons/Å**2)49.6
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelTFS KRIOS
Minimum Defocus (nm)1000
Maximum Defocus (nm)4000
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
EM Software
TaskSoftware PackageVersion
PARTICLE SELECTIONcryoSPARC
MODEL REFINEMENTPHENIX1.20.1_4487
RECONSTRUCTIONcryoSPARC
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION