Navigation Tabs A DNA-stabilized atomically precise silver nanorod with emission at 960 nm
Serial Crystallography (SX)
Serial Crystallography (SX)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 293 50 mM MOPS, 10 mM spermine, 10 mM KNO3, 10% MPD 2 VAPOR DIFFUSION, HANGING DROP 7 293 50 mM 3-(N-morpholino)propanesulfonic acid, 10 mM spermine, 10 mM Ca(NO3), 10% 2-methyl-2,4-pentanediol against a reservoir solution of 40% 2-methyl-2,4-pentanediol.
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 27.215 α = 90 b = 53.171 β = 103.67 c = 27.215 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2024-10-12 M SINGLE WAVELENGTH 2 2 x-ray 100 PIXEL DECTRIS EIGER2 S 16M 2024-10-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-5A 1.9 Photon Factory BL-5A 2 SYNCHROTRON MAX IV BEAMLINE BioMAX 0.6199 MAX IV BioMAX
Serial Crystallography Sample delivery method Diffraction ID Description Sample Delivery Method 1 fixed target 2 fixed target
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 2 1.3 26.4 97.1 0.111 0.13 0.993 7.25 3.6 35689
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 1.3 1.33 0.319 0.376 0.899
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING FREE R-VALUE 1.3 16.82 1.98 35654 3521 97.16 0.1632 0.1631 0.1557 0.1642 0.1565
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 28.714 f_angle_d 1.21 f_chiral_restr 0.097 f_plane_restr 0.018 f_bond_d 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 646 Solvent Atoms 39 Heterogen Atoms 30
Software Software Software Name Purpose PHENIX refinement XSCALE data scaling Sir2014 phasing AutoSol phasing XDS data reduction
