The complex of alpha-synuclein in the presence of PD6


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1(1H-1H-15N)-NOESY-HSQC0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
2(1H-13C-1H)-NOESY-HSQC0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
3(1H-1H-15N)-NOESY-HSQC0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
4(1H-13C-1H)-NOESY-HSQC0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
53D HNCACB0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
63D CBCA(CO)NH0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
72D 1H-13C HSQC0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
82D 1H-15N HSQC0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
93D TOCSY-HSQC0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
102D 1H-13C HSQC0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
112D 1H-15N HSQC0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
123D HNCACB0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
133D CBCA(CO)NH0.20 mM alpha-synuclein, 0.40 mM [U-100% 13C; U-100% 15N] PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
143D HCCH-TOCSY0.50 mM [U-100% 13C; U-100% 15N] alpha-synuclein, 1.00 mM PD690% H2O/10% D2O0.1627 mM7.51 atm283.15Bruker AVANCE NEO 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO600
NMR Refinement
MethodDetailsSoftware
naPoky
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number194
Conformers Submitted Total Number16
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee
2structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
5structure calculationHADDOCKBonvin
3refinementPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee
4peak pickingPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee