☰ Navigation Tabs
Pseudomonas aeruginosa FabF C164A in complex with 4-(1H-pyrazole-3-carboxamido)butanoic acid
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other In-house determined apo structure
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 298 0.24 ammonium formate and 35% PEG3350
Crystal Properties Matthews coefficient Solvent content 2.11 41.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.8 α = 90 b = 103.8 β = 90 c = 141.72 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2022-11-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PETRA III, DESY BEAMLINE P11 1.03321 PETRA III, DESY P11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.47 48.74 99.9 0.999 13.2 7.4 125625
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.47 1.5 100 0.482 7.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.47 48.73 125580 6418 99.811 0.163 0.1616 0.1898 0.1854 27.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.99 0.283 0.708
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 16.709 r_dihedral_angle_3_deg 13.151 r_dihedral_angle_2_deg 9.874 r_lrange_other 7.034 r_lrange_it 7.031 r_dihedral_angle_1_deg 6.658 r_scangle_other 6.257 r_scangle_it 6.255 r_scbond_it 4.499 r_scbond_other 4.447
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 16.709 r_dihedral_angle_3_deg 13.151 r_dihedral_angle_2_deg 9.874 r_lrange_other 7.034 r_lrange_it 7.031 r_dihedral_angle_1_deg 6.658 r_scangle_other 6.257 r_scangle_it 6.255 r_scbond_it 4.499 r_scbond_other 4.447 r_mcangle_it 3.253 r_mcangle_other 3.253 r_mcbond_other 2.359 r_mcbond_it 2.356 r_angle_refined_deg 1.983 r_angle_other_deg 0.791 r_nbd_refined 0.208 r_nbtor_refined 0.17 r_symmetry_nbd_other 0.166 r_nbd_other 0.14 r_xyhbond_nbd_refined 0.129 r_chiral_restr 0.109 r_symmetry_nbd_refined 0.089 r_symmetry_xyhbond_nbd_refined 0.085 r_symmetry_nbtor_other 0.074 r_ncsr_local_group_1 0.067 r_bond_refined_d 0.012 r_gen_planes_refined 0.011 r_bond_other_d 0.003 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6066 Nucleic Acid Atoms Solvent Atoms 322 Heterogen Atoms 132
Software Software Software Name Purpose REFMAC refinement XDS data reduction pointless data scaling PHASER phasing