9GRK | pdb_00009grk

Cdc42 Binding peptide (W14A)

SOLUTION NMR

---

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.8 mM [U-100% 15N] peptide, 50 mM sodium phosphate	90% H2O/10% D2O	50 mM	7.0	1 atm	298	Bruker AVANCE 800
2	3D 1H-15N NOESY	0.8 mM [U-100% 15N] peptide, 50 mM sodium phosphate	90% H2O/10% D2O	50 mM	7.0	1 atm	298	Bruker AVANCE 800
3	3D 1H-15N TOCSY	0.8 mM [U-100% 15N] peptide, 50 mM sodium phosphate	90% H2O/10% D2O	50 mM	7.0	1 atm	298	Bruker AVANCE 800
4	2D 1H-1H NOESY	0.7 mM peptide, 50 mM sodium phosphate	90% H2O/10% D2O	50 mM	7.0	1 atm	298	Bruker AVANCE 800
5	2D 1H-1H TOCSY	0.7 mM peptide, 50 mM sodium phosphate	90% H2O/10% D2O	50 mM	7.0	1 atm	298	Bruker AVANCE 500

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	500
2	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
simulated annealing		CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	35
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	CcpNmr Analysis	2.4	CCPN
2	structure calculation	ARIA		Linge, O'Donoghue and Nilges
3	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
4	peak picking	CcpNmr Analysis		CCPN