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iASPP-CTD fusion to p63 peptide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2VGE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 2 M sodium formate and 0.1 M TRIS pH 7.5
Crystal Properties Matthews coefficient Solvent content 3.58 65.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.119 α = 90 b = 94.12 β = 90 c = 179.314 γ = 90
Symmetry Space Group P 2 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 X 16M 2015-08-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 47.244 99.9 0.066 13.4 6.7 51860
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.47 100 0.2135
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 2.4 47.244 51860 2550 99.904 0.245 0.2428 0.2432 0.2796 0.2779 69.485
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.435 2.755 -2.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.697 r_dihedral_angle_4_deg 18.191 r_dihedral_angle_3_deg 17.651 r_lrange_it 13.112 r_lrange_other 13.111 r_scangle_it 9.636 r_scangle_other 9.636 r_mcangle_it 9.577 r_mcangle_other 9.575 r_dihedral_angle_1_deg 7.74
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.697 r_dihedral_angle_4_deg 18.191 r_dihedral_angle_3_deg 17.651 r_lrange_it 13.112 r_lrange_other 13.111 r_scangle_it 9.636 r_scangle_other 9.636 r_mcangle_it 9.577 r_mcangle_other 9.575 r_dihedral_angle_1_deg 7.74 r_mcbond_it 6.408 r_mcbond_other 6.406 r_scbond_it 6.317 r_scbond_other 6.317 r_angle_other_deg 1.163 r_angle_refined_deg 1.159 r_symmetry_xyhbond_nbd_refined 0.346 r_nbd_other 0.261 r_nbd_refined 0.213 r_symmetry_nbd_other 0.187 r_nbtor_refined 0.162 r_symmetry_nbd_refined 0.161 r_xyhbond_nbd_other 0.15 r_xyhbond_nbd_refined 0.134 r_symmetry_nbtor_other 0.077 r_ncsr_local_group_4 0.072 r_ncsr_local_group_6 0.062 r_ncsr_local_group_2 0.061 r_ncsr_local_group_5 0.06 r_ncsr_local_group_3 0.054 r_ncsr_local_group_1 0.053 r_chiral_restr 0.044 r_bond_refined_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6383 Nucleic Acid Atoms Solvent Atoms 73 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling PHASER phasing