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Human Angiotensin-1 converting enzyme C-domain in complex with a diprolyl inhibitor- SG3
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6F9T
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 289.15 0.1 M MIB pH 4.0, 5% glycerol, and 15% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.34 47.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.886 α = 90 b = 84.131 β = 90 c = 132.664 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 XE 16M 2019-09-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 0.9159 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 132.66 100 0.057 0.996 8.5 12.2 50194
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.94 0.503 0.579 1.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.9 71.149 50106 2395 99.968 0.17 0.1678 0.1697 0.217 0.2197 27.778
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.157 1.643 -0.486
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 15.107 r_dihedral_angle_3_deg 14.731 r_dihedral_angle_2_deg 8.516 r_lrange_it 8.172 r_scangle_it 7.796 r_dihedral_angle_1_deg 6.276 r_scbond_it 5.448 r_mcangle_it 3.892 r_mcbond_it 3.067 r_angle_refined_deg 2.532
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 15.107 r_dihedral_angle_3_deg 14.731 r_dihedral_angle_2_deg 8.516 r_lrange_it 8.172 r_scangle_it 7.796 r_dihedral_angle_1_deg 6.276 r_scbond_it 5.448 r_mcangle_it 3.892 r_mcbond_it 3.067 r_angle_refined_deg 2.532 r_nbtor_refined 0.322 r_symmetry_xyhbond_nbd_refined 0.241 r_nbd_refined 0.222 r_symmetry_nbd_refined 0.204 r_xyhbond_nbd_refined 0.167 r_chiral_restr 0.155 r_bond_refined_d 0.015 r_gen_planes_refined 0.015
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4659 Nucleic Acid Atoms Solvent Atoms 321 Heterogen Atoms 112
Software Software Software Name Purpose REFMAC refinement DIALS data reduction Aimless data scaling PHASER phasing