☰ Navigation Tabs
Human Angiotensin-1 converting enzyme C-domain in complex with a diprolyl inhibitor- SG18
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6F9T
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 289.15 0.1 M MIB pH 4.0, 5% glycerol, and 15% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.39 48.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.821 α = 90 b = 85.683 β = 90 c = 135.12 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 XE 16M 2019-10-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.97625 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 135.12 100 0.062 0.994 8.4 25.7 26594
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.49 0.296 0.841
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 2.4 72.466 26527 1320 99.955 0.182 0.1784 0.1787 0.2487 0.2519 35.814
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.45 -0.664 1.114
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 17.227 r_dihedral_angle_6_deg 15.501 r_dihedral_angle_2_deg 11.052 r_lrange_it 10.164 r_scangle_it 9.35 r_dihedral_angle_1_deg 7.224 r_scbond_it 6.615 r_mcangle_it 6.374 r_mcbond_it 4.658 r_angle_refined_deg 2.653
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 17.227 r_dihedral_angle_6_deg 15.501 r_dihedral_angle_2_deg 11.052 r_lrange_it 10.164 r_scangle_it 9.35 r_dihedral_angle_1_deg 7.224 r_scbond_it 6.615 r_mcangle_it 6.374 r_mcbond_it 4.658 r_angle_refined_deg 2.653 r_nbtor_refined 0.324 r_nbd_refined 0.234 r_symmetry_nbd_refined 0.2 r_symmetry_xyhbond_nbd_refined 0.183 r_chiral_restr 0.174 r_xyhbond_nbd_refined 0.165 r_bond_refined_d 0.013 r_gen_planes_refined 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4684 Nucleic Acid Atoms Solvent Atoms 158 Heterogen Atoms 85
Software Software Software Name Purpose REFMAC refinement DIALS data reduction Aimless data scaling PHASER phasing