☰ Navigation Tabs
Gcn2 dimer bound to the 60S ribosomal subunit
Refinement RMS Deviations Key Refinement Restraint Deviation r_lrange_it 52.939 r_lrange_other 52.939 r_mcangle_it 17.056 r_mcangle_other 17.056 r_scangle_it 15.373 r_scangle_other 15.373 r_dihedral_angle_3_deg 14.471 r_dihedral_angle_6_deg 13.94 r_mcbond_it 9.794 r_mcbond_other 9.794
RMS Deviations Key Refinement Restraint Deviation r_lrange_it 52.939 r_lrange_other 52.939 r_mcangle_it 17.056 r_mcangle_other 17.056 r_scangle_it 15.373 r_scangle_other 15.373 r_dihedral_angle_3_deg 14.471 r_dihedral_angle_6_deg 13.94 r_mcbond_it 9.794 r_mcbond_other 9.794 r_scbond_it 8.995 r_scbond_other 8.995 r_dihedral_angle_1_deg 8.175 r_dihedral_angle_2_deg 2.34 r_dihedral_angle_other_2_deg 1.759 r_angle_refined_deg 1.193 r_angle_other_deg 0.459 r_metal_ion_refined 0.221 r_nbtor_refined 0.208 r_symmetry_nbd_other 0.167 r_ncsr_local_group_1 0.165 r_nbd_refined 0.163 r_xyhbond_nbd_refined 0.13 r_ncsr_local_group_2 0.095 r_symmetry_nbtor_other 0.073 r_chiral_restr 0.054 r_symmetry_xyhbond_nbd_other 0.053 r_chiral_restr_other 0.023 r_gen_planes_refined 0.009 r_bond_refined_d 0.007 r_gen_planes_other 0.003 r_bond_other_d 0.001 r_ext_dist_refined_b
Sample 60S ribosomal subunit with bound Gcn2 dimer
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE-PROPANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 14552 Reported Resolution (Å) 3.1 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 400 Maximum Defocus (nm) 900 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION crYOLO 1.8.3 CTF CORRECTION RELION 4.0.1 INITIAL EULER ASSIGNMENT RELION 4.0.1 FINAL EULER ASSIGNMENT RELION 4.0.1 RECONSTRUCTION RELION 4.0.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION