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Structure of the C-terminal domain of CKAP5/chTOG
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.5 mM [U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA NaN3 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE III HD 950 2 3D 1H-13C NOESY aliphatic 0.5 mM [U-13C; U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA sodium azide 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE III 800 3 3D 1H-13C NOESY aromatic 0.5 mM [U-13C; U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA sodium azide 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE 700 4 15N IPAP 0.5 mM [U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA NaN3 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE III 800 5 2D 1H-15N HSQC 0.5 mM [U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA NaN3 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE III 800 6 2D 1H-13C HSQC aliphatic 0.5 mM [U-13C; U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA sodium azide 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE III 800 7 2D 1H-13C HSQC aromatic 0.5 mM [U-13C; U-15N] CKAP5, 20 mM NA HEPES, 150 mM NA glutamic acid, 150 mM NA arginine, 2 mM NA DTT, 0.02 % NA sodium azide 95% H2O/5% D2O 150 mM 7.2 1 atm 298 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 800 2 Bruker AVANCE 700 3 Bruker AVANCE III HD 950
NMR Refinement Method Details Software simulated annealing standard protocol X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 4.1 Bruker Biospin 2 chemical shift assignment CcpNmr Analysis 2.4 CCPN 3 structure calculation ARIA Linge, O'Donoghue and Nilges 4 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore