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NMR structure of the Z0 CCHC zinc-finger of transcription repressor Bcl11A
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 40 uM Bcl11A-Z0, 600 uM Zn2+ 90% H2O/10% D20 0.6 mM 6.3 1 atm 298 Varian INOVA 600 2 2D 1H-1H TOCSY 40 uM Bcl11A-Z0, 600 uM Zn2+ 90% H2O/10% D20 0.6 mM 6.3 1 atm 298 Varian INOVA 600 3 2D 1H-1H NOESY 40 uM Bcl11A-Z0, 600 uM Zn2+, 100% D20 100% D2O 0.6 mM 5.8 1 atm 298 Varian INOVA 600 4 2D 1H-1H NOESY 40 uM Bcl11A-Z0, 600 uM Zn2+, 100% D20 100% D2O 0.6 mM 5.8 1 atm 298 Varian INOVA 600 5 2D 1H-1H TOCSY 40 uM Bcl11A-Z0, 600 uM Zn2+, 100% D20 100% D2O 0.6 mM 5.8 1 atm 298 Varian INOVA 600 6 2D 1H-13C HSQC 40 uM Bcl11A-Z0, 600 uM Zn2+, 100% D20 100% D2O 0.6 mM 5.8 1 atm 298 Varian INOVA 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 60 Conformers Submitted Total Number 20 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CcpNmr Analysis 2.5.2 CCPN 2 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 3 refinement X-PLOR NIH 3.8 Schwieters, Kuszewski, Tjandra and Clore 4 peak picking CcpNmr Analysis 2.5.2 CCPN