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Full-length cross-linked Contactin 2 (CNTN2)
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 7.2942 f_angle_d 1.1985 f_chiral_restr 0.0698 f_plane_restr 0.0109 f_bond_d 0.0097
Sample Contactin-2 full length (Ig1-FN4)
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument LEICA EM GP Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 86023 Reported Resolution (Å) 3.54 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 600 Maximum Defocus (nm) 1600 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 81000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION SerialEM CTF CORRECTION cryoSPARC 4.3.0 MODEL FITTING UCSF ChimeraX MODEL FITTING ISOLDE INITIAL EULER ASSIGNMENT cryoSPARC 4.3.0 FINAL EULER ASSIGNMENT cryoSPARC 4.3.0 RECONSTRUCTION cryoSPARC 4.3.0 MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION