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ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 1-5% MPD 20 MM BIS-TRIS-PROPANE, PH 7.0 10 MM NICL2
Crystal Properties Matthews coefficient Solvent content 3.4 68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.05 α = 90 b = 77.75 β = 90 c = 94.42 γ = 90
Symmetry Space Group P 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE RIGAKU RAXIS MIRRORS 1997-10-15 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 20 17753 17753
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.4 20 17359 17359 1767 95.7 0.218 0.218 0.239 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.17 -0.26 0.09
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 18.9 x_scangle_it 6.53 x_scbond_it 4.24 x_mcangle_it 3.85 x_mcbond_it 2.6 x_improper_angle_d 1.12 x_angle_deg 1.1 x_bond_d 0.007 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 18.9 x_scangle_it 6.53 x_scbond_it 4.24 x_mcangle_it 3.85 x_mcbond_it 2.6 x_improper_angle_d 1.12 x_angle_deg 1.1 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1040 Nucleic Acid Atoms 1218 Solvent Atoms 38 Heterogen Atoms 1
Software Software Software Name Purpose X-PLOR refinement DENZO data reduction SCALEPACK data scaling