8Z0N | pdb_00008z0n

Structure and dynamics of Drk-SH2 domain and its site-specific interaction with Sev

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	13C-seperated NOESY	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
2	15N-seperated NOESY	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
3	2D 1H-15N HSQC	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
4	3D HNCO	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
5	3D HN(CA)CO	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
6	3D HNCA	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
7	3D HN(CO)CA	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
8	3D CBCA(CO)NH	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
9	3D CBCANH	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
10	3D CC(CO)NH	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
11	3D H(CCO)NH	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
12	2D 1H-13C HSQC	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
13	3D HBHA(CO)NH	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
15	3D HN(CO)CA	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
14	3D HN(CA)CO	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600
16	3D HCCH-TOCSY	300 uM [U-10% 13C; U-100% 15N] SH2 domain of Drk adaptor protein	90% H2O/10% D2O	200 mM	7.4	AMBIENT atm	298	Bruker AVANCE III 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600

NMR Refinement
Method	Details	Software
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
2	processing	Azara	2.8	Boucher
1	chemical shift assignment	CcpNmr Analysis	2.5.1	CCPN
3	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
4	collection	TopSpin		Bruker Biospin
5	refinement	Amber		Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman