Structure of human PALB2 coiled-coil domain
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D HNCO | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 600 |
| 2 | 3D 1H-13C NOESY | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 600 |
| 3 | 3D 1H-15N NOESY | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 600 |
| 4 | 3D C(CO)NH | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 600 |
| 5 | 3D HNCACB | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 800 |
| 7 | 3D CBCA(CO)NH | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 800 |
| 6 | 3D HCCH-TOCSY | 0.5 mM [U-100% 13C; U-100% 15N] Palb2 | 90% H2O/10% D2O | 300 mM | 8 | 1 atm | 298 | Bruker AVANCE III HD 600 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III HD | 600 |
| 2 | Bruker | AVANCE III HD | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| DGSA-distance geometry simulated annealing | NMRDraw | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | chemical shift assignment | PINE-SPARKY | Markley | |
| 2 | structure calculation | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
| 3 | peak picking | Sparky | Goddard | |
| 4 | processing | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |














