8XI8

The Crystal Structure of TAB1 from Biortus.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.2M Li2SO4, 0.1M Tris-HCl pH8.5, 16% PEG 4000
Crystal Properties
Matthews coefficientSolvent content
4.9174.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 144.525α = 90
b = 144.525β = 90
c = 66.218γ = 120
Symmetry
Space GroupP 3 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2020-10-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL45XU1SPring-8BL45XU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.3548.821000.1849.51011715
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.353.621.168

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE3.3548.821171455599.9230.2030.20070.2521115.34
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.8670.4330.867-2.812
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg13.586
r_lrange_it12.753
r_lrange_other12.752
r_dihedral_angle_6_deg10.001
r_mcangle_it8.972
r_mcangle_other8.97
r_scangle_it8.893
r_scangle_other8.891
r_dihedral_angle_1_deg5.727
r_mcbond_it5.396
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg13.586
r_lrange_it12.753
r_lrange_other12.752
r_dihedral_angle_6_deg10.001
r_mcangle_it8.972
r_mcangle_other8.97
r_scangle_it8.893
r_scangle_other8.891
r_dihedral_angle_1_deg5.727
r_mcbond_it5.396
r_mcbond_other5.396
r_scbond_it5.124
r_scbond_other5.123
r_dihedral_angle_2_deg4.218
r_angle_refined_deg0.819
r_angle_other_deg0.269
r_symmetry_xyhbond_nbd_refined0.241
r_nbd_refined0.206
r_symmetry_nbd_other0.188
r_nbtor_refined0.17
r_xyhbond_nbd_refined0.132
r_nbd_other0.122
r_symmetry_nbtor_other0.076
r_symmetry_xyhbond_nbd_other0.044
r_chiral_restr0.035
r_symmetry_nbd_refined0.019
r_gen_planes_refined0.003
r_bond_refined_d0.002
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2736
Nucleic Acid Atoms
Solvent Atoms18
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing