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The Crystal Structure of FES from Biortus.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4DYL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.2M CaCl2, 0.1M Tris pH8.5, 25% PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.17 43.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 191.882 α = 90 b = 29.952 β = 107.674 c = 73.792 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2023-07-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.979514 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 45.75 87.8 0.014 9.9 5.1 8125
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.9 2.98 0.385
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 2.9 45.748 8125 383 87.159 0.273 0.2695 0.2728 0.3394 0.3428 50.99
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -5.945 4.099 0.948 1.982
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.529 r_dihedral_angle_4_deg 15.317 r_dihedral_angle_3_deg 13.292 r_dihedral_angle_1_deg 4.303 r_lrange_it 2.919 r_lrange_other 2.918 r_angle_refined_deg 1.108 r_angle_other_deg 1.024 r_mcangle_it 0.91 r_mcangle_other 0.91
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.529 r_dihedral_angle_4_deg 15.317 r_dihedral_angle_3_deg 13.292 r_dihedral_angle_1_deg 4.303 r_lrange_it 2.919 r_lrange_other 2.918 r_angle_refined_deg 1.108 r_angle_other_deg 1.024 r_mcangle_it 0.91 r_mcangle_other 0.91 r_scangle_it 0.563 r_scangle_other 0.563 r_mcbond_it 0.489 r_mcbond_other 0.489 r_symmetry_xyhbond_nbd_refined 0.288 r_scbond_it 0.279 r_scbond_other 0.279 r_symmetry_nbd_other 0.155 r_nbd_refined 0.15 r_nbd_other 0.131 r_nbtor_refined 0.13 r_symmetry_nbd_refined 0.109 r_xyhbond_nbd_refined 0.106 r_symmetry_nbtor_other 0.077 r_chiral_restr 0.033 r_xyhbond_nbd_other 0.029 r_gen_planes_refined 0.002 r_bond_refined_d 0.001 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3012 Nucleic Acid Atoms Solvent Atoms 47 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing