8WLS

Bcl-xL in complex with HBx BH3 delta C peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-15N] HBx-Bcl-xL fusion90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
22D 1H-15N HSQC0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
32D 1H-13C HSQC0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
43D HNCO0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
53D HNCA0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
113D HNCACB0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
103D CBCA(CO)NH0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
93D HBHA(CO)NH0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
83D (H)CC(CO)NH0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
73D HCCH-TOCSY0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
63D CCH-TOCSY0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
123D 1H-13C NOESY0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
133D 1H-15N NOESY0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
143D [F1] 13C,15N-filtered 1H-13C-NOESY0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM6.81 atm308Bruker AVANCE III 600
153D [F1] 13C,15N-filtered 1H-13C-NOESY0.5 mM [U-13C; U-15N] HBx-Bcl-xL fusion, 1.2 mM Non Bcl-xL, 0.3 mM [U-13C; U-15N] HBx90% H2O/10% D2O50 mM71 atm308Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model20 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisMagRO-NMRViewNaohiro, Kobayashi
3structure calculationCYANA3.98Guntert, Mumenthaler and Wuthrich
4refinementAmber12Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman