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HADDOCK models of human alphaM I-domain bound to the the N-terminal domain of the cytokine pleiotrophin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D F1-13C-edited/F3-13C,15N-filtered HSQCNOESY 0.2 mM [U-13C; U-15N] human alphaM I-domain, 1 mM The N-terminal domain of pleiotrophin 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III HD 850 2 3D HCCH-TOCSY 0.5 mM [U-13C; U-15N] human alphaM I-domain 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III HD 850 3 3D HCCH-TOCSY 0.5 mM [U-13C; U-15N] The N-terminal domain of pleiotrophin 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III HD 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III HD 850
NMR Refinement Method Details Software simulated annealing The Integrin alpha-M starting structure is 1JLM. The Pleiotrophin starting structure is 2N6F. HADDOCK
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRViewJ Bruce Johnson 2 structure calculation HADDOCK Bonvin