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Sterile Alpha Motif (SAM) domain from Tric1, Arabidopsis thaliana
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293.15 2.0 M ammonium sulphate, 0.1 M Tris, 12 mg/mL SAM protein 2 MICROBATCH 8.5 293.15 1.0 M ammonium sulphate, 0.1 M Tris, 6.15 mg/mL SeMet SAM protein (0.5uL:0.5uL drop under paratone oil)
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 28.639 α = 90 b = 92.121 β = 90 c = 93.31 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2015-12-11 M SINGLE WAVELENGTH 2 2 x-ray 100 CCD ADSC QUANTUM 210r 2016-11-11 M MAD 3 2 x-ray 100 CCD ADSC QUANTUM 210r 2016-11-11 M MAD 4 2 x-ray 100 CCD ADSC QUANTUM 210r 2016-11-11 M MAD 5 2 x-ray 100 CCD ADSC QUANTUM 210r 2016-11-11 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.9537 Australian Synchrotron MX1 2 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.9793 Australian Synchrotron MX1 3 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.9795 Australian Synchrotron MX1 4 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.9537 Australian Synchrotron MX1 5 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.9871 Australian Synchrotron MX1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.48 29.2 99.9 0.055 0.015 1 28.1 14.3 42224 19.28
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.48 1.51 99.1 1.31 0.403 0.671 1.8 11.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD FREE R-VALUE 1.48 29.17 1.35 42146 2115 99.93 0.1801 0.1792 0.1791 0.1981 0.1981 29.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.1575 f_angle_d 1.163 f_chiral_restr 0.0807 f_plane_restr 0.0383 f_bond_d 0.012
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1561 Nucleic Acid Atoms Solvent Atoms 180 Heterogen Atoms 1
Software Software Software Name Purpose PHENIX refinement XDS data reduction Aimless data scaling AutoSol phasing