☰ Navigation Tabs
Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active state 1b
Refinement RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 46.328 r_long_range_B_other 46.327 r_scangle_other 30.611 r_mcangle_it 26.135 r_mcangle_other 26.133 r_dihedral_angle_3_deg 20.524 r_scbond_it 19.574 r_scbond_other 19.572 r_mcbond_it 17.532 r_mcbond_other 17.53
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 46.328 r_long_range_B_other 46.327 r_scangle_other 30.611 r_mcangle_it 26.135 r_mcangle_other 26.133 r_dihedral_angle_3_deg 20.524 r_scbond_it 19.574 r_scbond_other 19.572 r_mcbond_it 17.532 r_mcbond_other 17.53 r_dihedral_angle_1_deg 6.133 r_dihedral_angle_2_deg 4.953 r_angle_refined_deg 1.55 r_angle_other_deg 0.46 r_chiral_restr 0.108 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_gen_planes_other 0.002 r_bond_other_d r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Diversity-generating retroelement (DGR) ribonucleoprotein with dCpCpp
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 121652 Reported Resolution (Å) 3.2 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 55
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 400 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION PARTICLE SELECTION cryoSPARC PARTICLE SELECTION Topaz PARTICLE SELECTION Gautomatch IMAGE ACQUISITION SerialEM CTF CORRECTION Gctf CTF CORRECTION CTFFIND MODEL FITTING Coot CLASSIFICATION cryoSPARC RECONSTRUCTION cryoSPARC 3.1.1 MODEL REFINEMENT CCP4 package
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY