8TFU

Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 1


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.22930.48 M sodium phosphate monobasic monohydrate, 1.2 M potassium phosphate dibasic
Crystal Properties
Matthews coefficientSolvent content
2.1342.29

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 37.81α = 90
b = 68.252β = 90
c = 70.888γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6M2020-08-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 31-ID0.9793APS31-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.4835.44480.10.06214.16.225018
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.481.5921.21.2171.330.5260.4091.26.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE1.48234.14925017121580.1060.1830.18150.220229.448
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.2460.141-0.387
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg15.653
r_dihedral_angle_6_deg14.343
r_lrange_other9.075
r_lrange_it9.065
r_scangle_it7.751
r_scangle_other7.747
r_dihedral_angle_1_deg6.828
r_scbond_it4.935
r_scbond_other4.931
r_mcangle_other4.365
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg15.653
r_dihedral_angle_6_deg14.343
r_lrange_other9.075
r_lrange_it9.065
r_scangle_it7.751
r_scangle_other7.747
r_dihedral_angle_1_deg6.828
r_scbond_it4.935
r_scbond_other4.931
r_mcangle_other4.365
r_mcangle_it4.363
r_dihedral_angle_2_deg3.563
r_mcbond_it3.03
r_mcbond_other3.024
r_angle_refined_deg1.584
r_angle_other_deg0.531
r_symmetry_nbd_refined0.296
r_symmetry_xyhbond_nbd_refined0.252
r_nbd_refined0.218
r_nbd_other0.201
r_nbtor_refined0.177
r_symmetry_nbd_other0.173
r_xyhbond_nbd_refined0.166
r_chiral_restr0.079
r_symmetry_nbtor_other0.077
r_bond_refined_d0.01
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1258
Nucleic Acid Atoms
Solvent Atoms149
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
autoPROCdata reduction
Aimlessdata scaling
MOLREPphasing