8SEM
Structural and functional characterisation of Tst2, a novel TRPV1 inhibitory peptide from the Australian sea anemone Telmatactis stephensoni
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 550 uM [U-100% 13C; U-100% 15N] Tst2 | 90% H2O/10% D2O | 0.55 mM | 4.7 | 1 bar | 293 | Bruker AVANCE III 600 |
2 | 3D 1H-15N NOESY | 550 uM [U-100% 13C; U-100% 15N] Tst2 | 90% H2O/10% D2O | 0.55 mM | 4.7 | 1 bar | 293 | Bruker AVANCE III 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR NIH | 2.48 | Schwieters, Kuszewski, Tjandra and Clore |
2 | structure calculation | CYANA | 3.98.13 | Guntert, Mumenthaler and Wuthrich |
3 | chemical shift assignment | Sparky | 3.134 | Goddard |
4 | peak picking | Sparky | 3.134 | Goddard |