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Structure of rat organic anion transporter 1 (OAT1) in complex with probenecid
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 3.667 f_angle_d 0.489 f_chiral_restr 0.036 f_plane_restr 0.003 f_bond_d 0.002
Sample Rat OAT1/probenecid complex solubilized in detergent LMNG
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 73688 Reported Resolution (Å) 2.86 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 60
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 105000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 4 IMAGE ACQUISITION Leginon CTF CORRECTION CTFFIND 4 MODEL REFINEMENT PHENIX FINAL EULER ASSIGNMENT RELION FINAL EULER ASSIGNMENT cryoSPARC RECONSTRUCTION RELION
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION