8S9E

Solution structure of jarastatin (rJast), a disintegrin from Bothrops jararaca


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III 800
22D 1H-13C HSQC800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III HD 900
33D HNCA800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III 800
43D HNCACB800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III 800
53D CBCA(CO)NH800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III 800
63D HNCO800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III 800
7HN(CA)CO800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III 800
8HBHA(CO)NH800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III HD 900
9HCCH-TOCSY800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III HD 900
1015N NOESY-HSQC800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III HD 900
1113C NOESY-HSQC800 uM [U-100% 13C; U-100% 15N] rJAST90% H2O/10% D2O5 mM6.01 atm298Bruker AVANCE III HD 900
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
2BrukerAVANCE III HD900
NMR Refinement
MethodDetailsSoftware
molecular dynamicsWater refinementCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number500
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
2refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
3structure calculationARIA2.3Linge, O'Donoghue and Nilges
4processingNMRPipe2022.311.13.21Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5chemical shift assignmentCcpNmr Analysis2.5.2CCPN
6collectionTopSpin3.5Bruker Biospin
1structure calculationCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read