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Discovery of the first orally bioavailable ADAMTS7 inhibitor BAY-9835
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 not known
Crystal Properties Matthews coefficient Solvent content 2.37 48.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.245 α = 90 b = 62.986 β = 90 c = 59.477 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2018-04-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 1.0 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.96 43.24 99.7 0.086 0.098 0.997 12.59 4.48 12419
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.96 2.21 0.445 0.505 0.897
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.96 43.24 11180 1239 99.71 0.17736 0.17279 0.182 0.21904 0.2242 RANDOM 30.522
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.15 -0.23 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.891 r_dihedral_angle_4_deg 21.7 r_dihedral_angle_3_deg 9.366 r_dihedral_angle_1_deg 6.925 r_long_range_B_refined 5.739 r_long_range_B_other 5.675 r_scangle_other 4.239 r_scbond_it 3.133 r_scbond_other 3.13 r_mcangle_other 2.628
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.891 r_dihedral_angle_4_deg 21.7 r_dihedral_angle_3_deg 9.366 r_dihedral_angle_1_deg 6.925 r_long_range_B_refined 5.739 r_long_range_B_other 5.675 r_scangle_other 4.239 r_scbond_it 3.133 r_scbond_other 3.13 r_mcangle_other 2.628 r_mcangle_it 2.624 r_mcbond_it 1.88 r_mcbond_other 1.846 r_angle_refined_deg 1.505 r_angle_other_deg 1.327 r_chiral_restr 0.093 r_bond_refined_d 0.013 r_gen_planes_refined 0.009 r_gen_planes_other 0.009 r_bond_other_d 0.006 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1238 Nucleic Acid Atoms Solvent Atoms 126 Heterogen Atoms 39
Software Software Software Name Purpose XDS data reduction XSCALE data scaling REFMAC refinement XDS data scaling MOLREP phasing