SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NOESY | 1.1 mM [U-100% 13C; U-100% 15N] TonB-CTD(154-242) | 90% H2O/10% D2O | 20 mM | 6 | AMBIENT atm | 298 | Varian INOVA 800 |
| 2 | NOESY | 1.1 mM [U-100% 13C; U-100% 15N] TonB-CTD(154-242) | 90% H2O/10% D2O | 20 mM | 6 | AMBIENT atm | 298 | Bruker AVANCE III 950 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 800 |
| 2 | Varian | INOVA | 600 |
| 3 | Bruker | AVANCE III | 950 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure calculation | CYANA | 3.0 | Guentert |
| 2 | refinement | Amber | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman | |
| 6 | chemical shift assignment | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 3 | data analysis | CcpNmr Analysis | 2 | CCPN |
| 4 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 5 | processing | TopSpin | Bruker Biospin | |
