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NMR solution structure of the green kiwi fruit allergen Act d 8.0101
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 2 2D 1H-13C HSQC 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 3 2D 1H-13C HSQC aromatic 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 4 3D HNCO 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 5 3D HN(CA)CO 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 6 3D HNCACB 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 7 3D CBCA(CO)NH 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 8 3D HCCH-TOCSY 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 9 3D 1H-15N TOCSY 0.5 mM [U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 10 3D (H)CC(CO)NH-TOCSY 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 11 3D 1H-15N NOESY 0.5 mM [U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 12 3D 1H-13C NOESY 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500 13 3D 1H-13C NOESY aromatic 0.5 mM [U-99% 13C; U-99% 15N] Green kiwi fruit allergen Act d 8.0101, 20 mM sodium phosphate 90% H2O/10% D2O 0 6.9 1 bar 298 Agilent Direct Drive 500
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Agilent Direct Drive 500
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 40 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment CcpNmr Analysis CCPN 3 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 4 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman