8Q29

TtX122A - A domain of unknown function from the Teredinibacter turnerae protein TERTU_3803

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP		292	0.1 M magnesium acetate, 15-25% PEG-3350

Crystal Properties
Matthews coefficient	Solvent content
2.17	43.3

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 48.081	α = 90
b = 75.167	β = 107.423
c = 69.074	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2017-05-01	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I04	0.97952	Diamond	I04

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.5	49.55	98.2	0.047	0.06	0.037	0.999	14.5	4.5		73564

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.5	1.53			0.409	0.523	0.322	0.881		4.6

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MAD	THROUGHOUT	1.5	49.55	73539	3529	98.019	0.114	0.1122	0.1563	19.013

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.381		0.326	0.727		-0.461

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	16.371
r_lrange_it	14.525
r_lrange_other	14.524
r_dihedral_angle_3_deg	12.894
r_scangle_it	11.296
r_scangle_other	11.294
r_mcangle_other	9.228
r_mcangle_it	9.225
r_scbond_it	8.582
r_scbond_other	8.58
r_dihedral_angle_1_deg	7.952
r_mcbond_it	7.057
r_mcbond_other	7.029
r_dihedral_angle_2_deg	4.84
r_rigid_bond_restr	4.777
r_angle_refined_deg	1.779
r_angle_other_deg	0.664
r_symmetry_xyhbond_nbd_refined	0.21
r_nbd_refined	0.195
r_symmetry_nbd_other	0.195
r_nbd_other	0.187
r_nbtor_refined	0.176
r_xyhbond_nbd_refined	0.131
r_symmetry_nbd_refined	0.116
r_chiral_restr	0.105
r_symmetry_nbtor_other	0.089
r_metal_ion_refined	0.062
r_bond_refined_d	0.014
r_xyhbond_nbd_other	0.014
r_gen_planes_refined	0.012
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3756
Nucleic Acid Atoms
Solvent Atoms	390
Heterogen Atoms	30

Software

Software
Software Name	Purpose
REFMAC	refinement
Aimless	data scaling
SHELX	phasing
XDS	data reduction